HCV Database
HCV sequence database

To our users Please note that the HCV database site is no longer funded. We try to keep the database updated and the tools running, but unfortunately, we cannot guarantee we can provide help for using this site. Data won't be manually curated either.


Purpose: The PepMap tool maps an input set of peptides on the HCV reference sequence H77. Peptide maps are generated in Fasta, PDF and HTML formats.

Details: This tool can be used to map epitopes, functional domains, or any protein region of interest. In addition to generating peptide maps in Fasta, HTML and PDF formats, the tool displays a table with peptide locations both in HTML and text formats. For details, see PepMap Explanation.

Paste or upload your input peptide set

[Sample Input]
or upload your file
Generate Maps of the Alignment

Please be patient. Depending on the size of your input file, the speed of your internet connection, and the load on our server, it can take several minutes. Do not resubmit your sequences; you won't get a result any faster - you'll just load up our server and make the process slower.

Questions or comments? Contact us at hcv-info@lanl.gov