To our users Please note that the HCV database site is no longer funded. We try to keep the database updated and the tools running, but unfortunately, we cannot guarantee we can provide help for using this site. Data won't be manually curated either.
#k codon indel-tally syn-tally nonsyn-tally #k The number of codons is: 193 #k The average behavior for 276 comparisons: #k Cumulative Per Codon #k __________________ __________________ #k codon indel syn nonsyn indel syn nonsyn aa avg syn 10 avg nonsyn 10 entropy Hq 1 0 0.52 0.39 0 0.52 0.39 V 0.354 0.498 0.562 -0.562 2 0 0.86 0.9 0 0.34 0.51 Q 0.309 0.606 0.679 -0.679 3 0 1.47 1 0 0.61 0.1 V 0.334 0.615 0.173 -0.173 4 0 1.63 1.65 0 0.16 0.64 A 0.327 0.605 0.837 -0.837 5 0 1.71 1.73 0 0.08 0.08 N 0.357 0.541 0.173 -0.173 6 0 1.8 2.4 0 0.08 0.67 R 0.401 0.533 0.965 -0.965 7 0 2.27 2.48 0 0.47 0.08 S 0.427 0.466 0.173 -0.173 8 0 2.73 3.99 0 0.46 1.51 G 0.443 0.485 1.834 -1.834 9 0 3.16 5 0 0.43 1 S 0.443 0.334 0.836 -0.836 10 0 3.55 5 0 0.39 0 Y 0.422 0.35 0 0 11 0 3.61 6.47 0 0.07 1.47 M 0.391 0.35 0.662 -0.662 12 0 4.2 7.07 0 0.59 0.6 V 0.423 0.203 0.837 -0.837 13 0 4.74 7.07 0 0.54 0 T 0.405 0.195 0 0 14 0 5.2 7.07 0 0.46 0 N 0.351 0.195 0 0 15 0 5.73 7.07 0 0.52 0 D 0.348 0.195 0 0 16 0 6.07 7.07 0 0.34 0 C 0.352 0.203 0 0 17 0 6.7 7.33 0 0.63 0.27 S 0.368 0.347 0.514 -0.514 18 0 7.16 7.33 0 0.46 0 N 0.343 0.429 0 0 19 0 7.38 8.5 0 0.22 1.16 S 0.36 0.437 1.339 -1.339 20 0 7.46 8.5 0 0.08 0 S 0.404 0.321 0 0 21 0 7.85 8.5 0 0.39 0 I 0.426 0.321 0 0 22 0 8.26 9.02 0 0.41 0.52 V 0.426 0.321 0.544 -0.544 23 0 8.26 9.02 0 0 0 W 0.434 0.349 0 0 24 0 8.69 9.02 0 0.43 0 Q 0.477 0.349 0 0 25 0 9.25 9.1 0 0.56 0.08 L 0.49 0.349 0.173 -0.173 26 0 9.75 10.54 0 0.5 1.44 E 0.485 0.341 1.339 -1.339 27 0 10.13 11.63 0 0.38 1.09 G 0.458 0.213 1.34 -1.34 28 0 10.75 11.71 0 0.63 0.08 A 0.486 0.104 0.173 -0.173 29 0 11.42 11.71 0 0.66 0 V 0.475 0.096 0 0 30 0 11.72 11.71 0 0.3 0 L 0.425 0.096 0 0 31 0 12.11 11.71 0 0.39 0 H 0.418 0.218 0 0 32 0 12.6 12.51 0 0.49 0.8 V 0.417 0.354 1.127 -1.127 33 0 13.03 12.51 0 0.43 0 P 0.413 0.396 0 0 34 0 13.59 12.51 0 0.56 0 G 0.37 0.396 0 0 35 0 14.1 12.51 0 0.51 0 C 0.357 0.487 0 0 36 0 14.33 12.67 0 0.23 0.16 I 0.367 0.543 0.287 -0.287 37 0 14.99 12.67 0 0.66 0 P 0.419 0.596 0 0 38 0 15.51 12.67 0 0.52 0 C 0.41 0.617 0 0 39 0 15.67 12.67 0 0.16 0 E 0.381 0.617 0 0 40 0 15.9 13.89 0 0.23 1.22 W 0.365 0.617 1.671 -1.671 41 0 16.28 15.25 0 0.38 1.36 N 0.358 0.519 1.545 -1.545 42 0 16.73 16.46 0 0.45 1.22 G 0.372 0.44 1.259 -1.259 43 1 16.73 16.46 1 0 0 - 0.395 0.318 0.173 -0.173 44 1 17.17 17.38 0 0.43 0.91 N 0.432 0.375 0.815 -0.815 45 1 17.77 17.93 0 0.61 0.56 A 0.452 0.292 0.895 -0.895 46 1 18.52 18.62 0 0.75 0.69 S 0.443 0.236 0.662 -0.662 47 1 19.09 18.83 0 0.57 0.21 R 0.394 0.195 0.287 -0.287 48 1 19.32 18.83 0 0.23 0 C 0.383 0.174 0 0 49 1 19.32 18.83 0 0 0 W 0.391 0.207 0 0 50 1 19.47 19.07 0 0.16 0.24 I 0.451 0.309 0.287 -0.287 51 1 19.99 19.64 0 0.52 0.57 P 0.458 0.36 0.815 -0.815 52 1 20.67 19.64 0 0.68 0 V 0.455 0.355 0 0 53 1 21.04 20.21 0 0.37 0.57 T 0.432 0.355 0.888 -0.888 54 1 21.67 20.29 0 0.63 0.08 S 0.469 0.298 0.173 -0.173 55 1 22.19 20.29 0 0.52 0 N 0.44 0.29 0 0 56 1 22.44 20.57 0 0.26 0.28 I 0.454 0.29 0.514 -0.514 57 1 22.91 20.57 0 0.46 0 A 0.455 0.359 0 0 58 1 23.22 20.9 0 0.31 0.33 V 0.425 0.459 0.377 -0.377 59 1 23.82 21.92 0 0.6 1.02 N 0.454 0.426 1.362 -1.362 60 1 24.05 22.67 0 0.23 0.75 Q 0.446 0.324 1.118 -1.118 61 1 24.54 23.19 0 0.49 0.52 P 0.48 0.305 0.69 -0.69 62 1 24.99 23.19 0 0.45 0 G 0.477 0.253 0 0 63 1 25.73 23.19 0 0.74 0 A 0.466 0.296 0 0 64 1 26.07 23.19 0 0.34 0 L 0.438 0.304 0 0 65 1 26.74 23.19 0 0.66 0 T 0.415 0.376 0 0 66 1 27 24.16 0 0.27 0.97 R 0.402 0.429 1.293 -1.293 67 1 27.16 25.16 0 0.16 1 G 0.429 0.332 0.815 -0.815 68 1 27.77 25.16 0 0.6 0 L 0.413 0.264 0 0 69 1 28.28 25.16 0 0.52 0 R 0.412 0.313 0 0 70 1 28.85 25.72 0 0.57 0.56 A 0.412 0.313 0.792 -0.792 71 1 29.31 25.72 0 0.46 0 H 0.363 0.257 0 0 72 1 29.65 26.16 0 0.34 0.43 I 0.317 0.32 0.792 -0.792 73 1 30.12 26.24 0 0.46 0.08 D 0.306 0.277 0.173 -0.173 74 1 30.22 26.96 0 0.11 0.72 I 0.322 0.269 1.133 -1.133 75 1 30.75 27.49 0 0.53 0.53 I 0.366 0.197 0.679 -0.679 76 1 31.29 27.49 0 0.54 0 V 0.387 0.189 0 0 77 1 31.29 27.81 0 0 0.32 A 0.382 0.189 0.514 -0.514 78 1 31.89 28.3 0 0.59 0.49 S 0.394 0.169 0.662 -0.662 79 1 32.41 28.3 0 0.52 0 A 0.389 0.12 0 0 80 1 32.49 28.3 0 0.08 0 T 0.376 0.12 0 0 81 1 32.49 28.93 0 0 0.63 F 0.426 0.194 1.054 -1.054 82 1 32.72 28.93 0 0.23 0 C 0.472 0.131 0 0 83 1 33.34 28.93 0 0.62 0 S 0.515 0.131 0 0 84 1 33.89 28.93 0 0.55 0 A 0.502 0.182 0 0 85 1 34.63 29.38 0 0.74 0.45 M 0.452 0.231 0.173 -0.173 86 1 35.12 29.38 0 0.49 0 Y 0.378 0.186 0 0 87 1 35.24 29.51 0 0.12 0.12 V 0.38 0.24 0.173 -0.173 88 1 35.78 29.51 0 0.54 0 G 0.433 0.267 0 0 89 1 36.17 29.51 0 0.39 0 D 0.444 0.318 0 0 90 1 36.75 30.24 0 0.58 0.74 V 0.421 0.318 1.185 -1.185 91 1 37.22 30.24 0 0.46 0 C 0.415 0.366 0 0 92 1 37.87 30.24 0 0.66 0 G 0.392 0.417 0 0 93 1 38.36 30.75 0 0.49 0.51 A 0.39 0.448 0.679 -0.679 94 1 38.41 31.24 0 0.05 0.49 L 0.398 0.448 0.873 -0.873 95 1 38.41 31.24 0 0 0 M 0.401 0.399 0 0 96 1 38.92 31.78 0 0.51 0.54 I 0.457 0.407 0.69 -0.69 97 1 39.57 32.18 0 0.65 0.39 A 0.457 0.446 0.562 -0.562 98 1 40.22 32.68 0 0.65 0.51 S 0.402 0.481 0.679 -0.679 99 1 40.38 32.68 0 0.16 0 Q 0.36 0.43 0 0 100 1 40.9 33.91 0 0.52 1.22 A 0.362 0.602 1.054 -1.054 101 1 41.13 34.42 0 0.23 0.51 F 0.353 0.48 0.815 -0.815 102 1 41.77 34.73 0 0.64 0.31 I 0.381 0.532 0.624 -0.624 103 1 42.34 35.24 0 0.57 0.51 I 0.369 0.509 0.662 -0.662 104 1 42.42 35.24 0 0.08 0 S 0.345 0.501 0 0 105 1 42.99 35.32 0 0.56 0.08 P 0.353 0.501 0.173 -0.173 106 1 43.5 36.26 0 0.51 0.93 R 0.349 0.493 1.105 -1.105 107 1 43.6 36.99 0 0.1 0.74 Y 0.35 0.4 0.976 -0.976 108 1 43.82 36.99 0 0.23 0 H 0.356 0.326 0 0 109 1 44 38.71 0 0.18 1.72 Q 0.362 0.334 1.664 -1.664 110 1 44.43 38.71 0 0.43 0 F 0.359 0.162 0 0 111 1 44.94 39.74 0 0.51 1.03 V 0.368 0.226 0.662 -0.662 112 1 45.46 39.83 0 0.52 0.08 Q 0.366 0.123 0.173 -0.173 113 1 45.78 40.25 0 0.33 0.43 D 0.366 0.237 0.616 -0.616 114 1 45.94 40.25 0 0.16 0 C 0.341 0.21 0 0 115 1 46.47 40.25 0 0.52 0 N 0.389 0.218 0 0 116 1 46.99 40.25 0 0.52 0 C 0.405 0.218 0 0 117 1 47.15 40.25 0 0.16 0 S 0.367 0.241 0 0 118 1 47.43 40.34 0 0.29 0.08 I 0.406 0.241 0.173 -0.173 119 1 47.59 40.34 0 0.15 0 Y 0.377 0.241 0 0 120 1 48.11 40.97 0 0.52 0.64 P 0.404 0.241 0.662 -0.662 121 1 48.6 40.97 0 0.49 0 G 0.352 0.177 0 0 122 1 49.12 42.2 0 0.52 1.22 H 0.332 0.177 1.263 -1.263 123 1 49.2 42.36 0 0.08 0.16 I 0.28 0.055 0.345 -0.345 124 1 49.84 42.44 0 0.64 0.08 P 0.272 0.039 0.345 -0.345 125 1 50.52 42.44 0 0.68 0 G 0.235 0.097 0 0 126 1 50.65 42.67 0 0.14 0.23 H 0.19 0.097 0.377 -0.377 127 1 51.21 42.67 0 0.55 0 R 0.176 0.074 0 0 128 1 51.21 42.75 0 0 0.08 M 0.181 0.082 0.173 -0.173 129 1 51.63 42.75 0 0.42 0 A 0.246 0.074 0 0 130 1 51.63 42.75 0 0 0 W 0.275 0.082 0 0 131 1 51.92 42.75 0 0.29 0 D 0.332 0.201 0 0 132 1 51.92 42.75 0 0 0 M 0.326 0.209 0 0 133 1 51.92 42.75 0 0 0 M 0.327 0.233 0 0 134 1 52.19 43.41 0 0.27 0.66 M 0.335 0.265 0.662 -0.662 135 1 52.42 43.41 0 0.23 0 N 0.369 0.245 0 0 136 1 52.42 43.41 0 0 0 W 0.405 0.245 0 0 137 1 53.02 43.49 0 0.6 0.08 S 0.439 0.245 0.173 -0.173 138 1 53.67 43.49 0 0.65 0 P 0.438 0.328 0 0 139 1 54.38 43.57 0 0.71 0.08 T 0.411 0.443 0.173 -0.173 140 1 54.95 44.76 0 0.57 1.19 A 0.395 0.435 1.195 -1.195 141 1 55.18 44.85 0 0.23 0.08 T 0.383 0.352 0.173 -0.173 142 1 55.18 45.09 0 0.01 0.24 M 0.418 0.344 0.456 -0.456 143 1 55.27 45.41 0 0.08 0.32 I 0.446 0.32 0.456 -0.456 144 1 55.87 45.87 0 0.61 0.46 M 0.501 0.345 0.544 -0.544 145 1 56.47 45.87 0 0.59 0 A 0.47 0.371 0 0 146 1 56.81 45.87 0 0.34 0 Y 0.473 0.44 0 0 147 1 57.4 46.78 0 0.59 0.91 L 0.457 0.5 1.072 -1.072 148 1 57.78 47.93 0 0.38 1.15 M 0.449 0.452 0.907 -0.907 149 1 58.34 47.93 0 0.55 0 R 0.45 0.393 0 0 150 1 58.79 48.29 0 0.45 0.36 V 0.427 0.533 0.512 -0.512 151 1 59.37 48.29 0 0.58 0 P 0.45 0.507 0 0 152 1 59.66 48.29 0 0.29 0 E 0.455 0.575 0 0 153 1 60.29 48.86 0 0.63 0.57 V 0.478 0.575 0.815 -0.815 154 1 60.59 49.59 0 0.3 0.72 V 0.415 0.518 1.062 -1.062 155 1 61.22 50.28 0 0.62 0.69 L 0.43 0.446 0.829 -0.829 156 1 61.4 50.88 0 0.18 0.6 E 0.434 0.377 0.829 -0.829 157 1 61.9 51.31 0 0.51 0.43 I 0.422 0.38 0.604 -0.604 158 1 62.29 51.87 0 0.39 0.56 I 0.42 0.337 0.815 -0.815 159 1 62.61 53.27 0 0.32 1.4 A 0.381 0.281 1.48 -1.48 160 1 63.29 53.37 0 0.68 0.1 G 0.438 0.147 0.173 -0.173 161 1 63.92 54.04 0 0.63 0.68 A 0.386 0.137 0.837 -0.837 162 1 64.44 54.04 0 0.52 0 H 0.372 0.069 0 0 163 1 64.44 54.04 0 0 0 W 0.328 0.069 0 0 164 1 64.89 54.04 0 0.45 0 G 0.374 0.084 0 0 165 1 65.55 54.04 0 0.66 0 V 0.329 0.084 0 0 166 1 65.61 54.67 0 0.06 0.63 M 0.292 0.084 0.918 -0.918 167 1 66.1 54.67 0 0.49 0 F 0.302 0.021 0 0 168 1 66.1 54.67 0 0 0 G 0.261 0.029 0 0 169 1 66.99 54.73 0 0.89 0.06 L 0.261 0.029 0 0 170 1 67.15 54.73 0 0.16 0 A 0.235 0.023 0 0 171 1 67.63 54.73 0 0.49 0 Y 0.271 0.023 0 0 172 1 67.72 54.73 0 0.08 0 F 0.222 0.023 0 0 173 1 68.17 54.89 0 0.46 0.15 S 0.248 0.087 0.287 -0.287 174 1 68.17 54.89 0 0 0 M 0.225 0.121 0 0 175 1 68.46 54.89 0 0.29 0 Q 0.248 0.121 0 0 176 1 68.62 54.89 0 0.16 0 G 0.271 0.121 0 0 177 1 68.71 54.97 0 0.08 0.08 A 0.331 0.127 0.173 -0.173 178 1 68.71 54.97 0 0 0 W 0.396 0.132 0 0 179 1 69.33 54.97 0 0.63 0 A 0.44 0.221 0 0 180 1 69.86 54.97 0 0.52 0 K 0.448 0.237 0 0 181 1 69.86 54.97 0 0 0 V 0.448 0.237 0 0 182 1 70.2 55.61 0 0.34 0.64 V 0.456 0.237 0.965 -0.965 183 1 70.43 56.1 0 0.23 0.49 V 0.46 0.196 0.662 -0.662 184 1 70.66 56.1 0 0.23 0 I 0.489 0.147 0 0 185 1 71.17 56.1 0 0.52 0 L 0.517777778 0.163333333 0 0 186 1 71.94 56.15 0 0.76 0.06 L 0.5175 0.18375 0 0 187 1 72.67 56.29 0 0.73 0.13 L 0.482857143 0.201428571 0 0 188 1 73.11 57.18 0 0.44 0.89 T 0.441666667 0.213333333 1.082 -1.082 189 1 73.82 57.34 0 0.71 0.16 A 0.442 0.078 0.287 -0.287 190 1 74.34 57.34 0 0.52 0 G 0.375 0.0575 0 0 191 1 74.42 57.34 0 0.08 0 V 0.326666667 0.076666667 0 0 192 1 74.81 57.56 0 0.38 0.23 E 0.45 0.115 0.377 -0.377 193 1 75.33 57.56 0 0.52 0 A 0.52 0 0 0