HCV Database
HCV sequence database
 



To our users Please note that the HCV database site is no longer funded. We try to keep the database updated and the tools running, but unfortunately, we cannot guarantee we can provide help for using this site. Data won't be manually curated either.


HCV primers


We have created a mailing list to spread information and answer questions about primers for HCV sequencing. If this page doesn't answer your question you can ask the members of this list. Unsubscribe information will be included in every message sent from the list.
To join the HCV primer mailing list


List of primers that have been used successfully to amplify multiple HCV genotypes:

------------------------Genotype-------------------
primers region 1 2 3 4 5 6 comments references
DM50 and DM51 + + + + + +   Murphy et al
493S, 987R, 502S, 975R + + + + + + Both inner and outer primer pairs work by themselves Ray et al
SV542as, SV360s, SV361s, SV362s, SV363s + + + + + + Hemi-nested PCR, degenerate primers; length of product is 394nt Sergei Viazov, Stefan Ross (unpublished)
view + + + + + +/-   Enomoto et al





Questions or comments? Contact us at hcv-info@lanl.gov