HCV Database
HCV sequence database
 



To our users Please note that the HCV database site is no longer funded. We try to keep the database updated and the tools running, but unfortunately, we cannot guarantee we can provide help for using this site. Data won't be manually curated either.


Consensus Maker v2.0.0

This interface creates one or multiple consensus sequences that can be modified by a large number of parameters. More info

Input
Paste your input here
[SAMPLE INPUT]
or upload your file

Options
Do consensus for each block Use plurality character in all blocks to resolve ties
Remove columns containing only gaps gap character(s):
Ignore characters other than
(nucleotides) or (amino acids)
Minimum number of sequences to do a consensus
Unanimous threshold
Majority threshold
Echo alignment in output
Do consensus of consensuses
Show mixed positions as IUPAC codes; ignore nucleotides below %.
Output Format Like input Pretty Output aligned
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Release Notes: For details on releases click here.

Known Bugs: For known bugs click here.

Wish List: For desired new features click here.




Questions or comments? Contact us at hcv-info@lanl.gov